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Oncotarget [JOURNAL]

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Retraction: MicroRNA-610 suppresses osteosarcoma oncogenicity via targeting TWIST1 expression.

Jin C, Feng Y, Ni Y … +1 more , Shan Z

Oncotarget · 2025 Oct · PMID 41048105 · Full text

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Loss of results in a hypoactive T cell phenotype accompanied by reduced pro-inflammatory signaling in a syngeneic orthotopic mouse model of ovarian high-grade serous carcinoma.

Haagsma J, Valdes YR, Ou X … +4 more , Rashu R, Haeryfar SMM, Petrik J, Shepherd TG

Oncotarget · 2025 Sep · PMID 40982347 · Full text

Ovarian high-grade serous carcinoma (HGSC) is an aggressive disease with an urgent need for improved therapies. Immunotherapies have proved useful for some cancers but have failed to provide benefits for HGSC. Improving... Ovarian high-grade serous carcinoma (HGSC) is an aggressive disease with an urgent need for improved therapies. Immunotherapies have proved useful for some cancers but have failed to provide benefits for HGSC. Improving our understanding of the mechanisms regulating the HGSC tumor microenvironment will facilitate the discovery of novel immunotherapies and help predict patient response. To this end, the development of syngeneic models is imperative to recapitulate immune responses observed in patients with HGSC. Yet, few syngeneic HGSC mouse models exist that accurately reflect the initiation and disease progression of human disease. In this study, we developed a syngeneic model reflecting both the site of origin and the genotype of early HGSC disease by deleting in mouse oviductal epithelial (OVE) cells. Orthotopic injection of OVE cells demonstrated advanced disease progression due to loss of , associated with a less active T cell phenotype. Molecular analyses uncovered altered inflammatory signaling in OVE4-ko cells. Further analysis on an ascites-derived cell line identified selection for decreased pro-inflammatory signaling. These results highlight potential mechanisms by which loss of p53 function contributes to an immunosuppressive microenvironment in HGSC, and provide insight into the role of ovarian and peritoneal microenvironments in regulating HGSC cell-intrinsic inflammatory signaling.

Retraction: miR-551b regulates epithelial-mesenchymal transition and metastasis of gastric cancer by inhibiting ERBB4 expression.

Song G, Zhang H, Chen C … +6 more , Gong L, Chen B, Zhao S, Shi J, Xu J, Ye Z

Oncotarget · 2025 Aug · PMID 40879699 · Full text

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manipulation of the protein homeostasis network in rhabdomyosarcoma.

Kwong K, Pan Y, Morales J … +8 more , Watson M, Allegakoen DV, Lee AG, Bivona TG, Wipf P, Guerriero CJ, Brodsky JL, Sabnis AJ

Oncotarget · 2025 Aug · PMID 40879698 · Full text

The protein homeostasis (proteostasis) network includes quality control systems that coordinate protein synthesis, folding, localization, and degradation, and is deregulated in numerous diseases including cancer. Loss of... The protein homeostasis (proteostasis) network includes quality control systems that coordinate protein synthesis, folding, localization, and degradation, and is deregulated in numerous diseases including cancer. Loss of proteostasis can activate lethal cellular stress responses, potentially opening a therapeutic window. Previous research demonstrated that MAL3-101, an inhibitor of heat shock protein 70-kD (HSP70) chaperones, selectively induces rhabdomyosarcoma (RMS) cell death via unfolded protein response (UPR) activation. RMS is the most common pediatric soft tissue sarcoma, and relapsed patients are rarely cured despite transient responses to DNA-damaging therapy. To examine whether MAL3-101 or more drug-like proteostasis inhibitors represent a new therapeutic strategy for RMS, we screened proteostasis components that might recapitulate the effects of MAL3-101 . We find that inhibition of , which encodes the p97 ATPase that facilitates proteasome-dependent degradation, similarly activates the UPR and induces RMS apoptosis. In mouse models, a preclinical p97 inhibitor showed superior bioavailability and anti-tumor activity compared to MAL3-101. Patient-derived xenografts exhibited a spectrum of p97 inhibitor sensitivities, and RNA sequencing of resistant tumors revealed elevated autophagy, nominating a biomarker of proteostasis adaptability. Together, these findings confirm that proteostasis inhibition can slow RMS growth and suggest that targeting compensatory network components might yield synergistic outcomes.

Correction: Regorafenib in combination with silybin as a novel potential strategy for the treatment of metastatic colorectal cancer.

Belli V, Sforza V, Cardone C … +13 more , Martinelli E, Barra G, Matrone N, Napolitano S, Morgillo F, Tuccillo C, Federico A, Dallio M, Loguercio C, Gravina AG, Palma R, Ciardiello F, Troiani T

Oncotarget · 2025 Aug · PMID 40879681 · Full text

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The SCD1 inhibitor aramchol interacts with regorafenib to kill GI tumor cells and .

Booth L, Booth MR, Roberts JL … +7 more , Yue Y, Kinsey E, Poklepovic A, Boone D, Cowhart LA, Baharaff A, Dent P

Oncotarget · 2025 Aug · PMID 40827882 · Full text

The anti-tumor actions of the Stearoyl-CoA desaturase (SCD1) inhibitor aramchol in tumor cells remains poorly understood. Aramchol interacted with the multi-kinase inhibitors sorafenib, regorafenib or lenvatinib, to kill... The anti-tumor actions of the Stearoyl-CoA desaturase (SCD1) inhibitor aramchol in tumor cells remains poorly understood. Aramchol interacted with the multi-kinase inhibitors sorafenib, regorafenib or lenvatinib, to kill GI tumor cells, with regorafenib exhibiting the greatest effect. In HCT116 cells homozygous for the autophagy-regulatory protein ATG16L1 T300, aramchol and regorafenib interacted to activate ATM and the AMPK and to inactivate mTORC1 and mTORC2. As a single agent, regorafenib inactivated eIF2α and it combined with aramchol to elevate GRP78 expression. In HCT116 cells expressing the ATG16L1 A300 isoform the drug-induced dephosphorylation of mTORC1 S2448 and mTORC2 S2481 and the increased phosphorylation of eIF2α S51 were significantly lower than in T300 cells. In cells expressing ATG16L1 T300, but not A300, regorafenib and/or the drug combination inactivated AKT, ERK1/2 and p70 S6K. Regorafenib and aramchol interacted to cause formation of autophagosomes which was significantly greater in cells expressing ATG16L1 T300. Aramchol as a single agent did not stimulate autophagic flux but further enhanced both flux and autolysosome formation caused by regorafenib. Knock down of Beclin1 reduced the lethality of regorafenib and aramchol as single agents and when combined whereas knock down of LAMP2 or BID did not reduce killing caused by aramchol as a single agent but did reduce the lethality of regorafenib alone and regorafenib plus aramchol. using the HuH7 adult hepatoma cell line, regorafenib and aramchol interacted to suppress tumor growth without normal tissue toxicities.

Retraction: Nestin suppression attenuates invasive potential of endometrial cancer cells by downregulating TGF-β signaling pathway.

Bokhari AA, Baker TM, Dorjbal B … +5 more , Waheed S, Zahn CM, Hamilton CA, Maxwell GL, Syed V

Oncotarget · 2025 Aug · PMID 40827879 · Full text

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Clinical and analytical validation of MI Cancer Seek®, a companion diagnostic whole exome and whole transcriptome sequencing-based comprehensive molecular profiling assay.

Domenyuk V, Benson K, Carter P … +30 more , Magee D, Zhang J, Bhardwaj N, Tae H, Wacker J, Rathi F, Miick S, Kohli A, Carroll J, Cuyugan L, Perez E, Zhang W, Collins J, Kennedy P, Ellis J, Stark A, Loskutov A, Cuttone B, Taylor B, Feldman R, Swenson J, Bryant D, Hahn-Lowry R, Kaushal R, Ribeiro JR, Abraham J, Radovich M, Sledge GW, Oberley M, Spetzler D

Oncotarget · 2025 Aug · PMID 40804002 · Full text

The precision oncology industry has evolved rapidly within the past two decades, although treatment selection remains a complex undertaking. Access to timely, accurate, and comprehensive molecular profiling data is imper... The precision oncology industry has evolved rapidly within the past two decades, although treatment selection remains a complex undertaking. Access to timely, accurate, and comprehensive molecular profiling data is imperative to improving patient outcomes within the expanding sphere of Food and Drug Administration (FDA)-approved targeted therapies. Caris Life Sciences has developed MI Cancer Seek, an FDA-approved whole exome and whole transcriptome sequencing-based molecular test encompassing adult and pediatric tumor profiling, eight companion diagnostics (CDx), and additional laboratory developed test (LDT) capabilities. Patient tissue is maximized through simultaneous analysis of DNA and RNA with minimum input of 50 ng. The clinical and analytical validation presented herein demonstrates non-inferiority of MI Cancer Seek relative to other FDA-approved CDx tests (>97% negative and positive percent agreement), as well as its precision, sensitivity, and specificity. Accordingly, MI Cancer Seek represents a safe and effective comprehensive molecular test option supporting biomarker-directed care for oncology patients.

Retraction: Indomethacin-based stimuli-responsive micelles combined with paclitaxel to overcome multidrug resistance.

Wang S, Tan X, Li S … +5 more , Zhou Y, Geng P, Hua A, Deng A, Yu Z

Oncotarget · 2025 Jul · PMID 40784035 · Full text

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Retraction: miR-133b inhibits glioma cell proliferation and invasion by targeting Sirt1.

Li C, Liu Z, Yang K … +5 more , Chen X, Zeng Y, Liu J, Li Z, Liu Y

Oncotarget · 2024 Dec · PMID 40784012 · Full text

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Retraction: Progesterone and calcitriol reduce invasive potential of endometrial cancer cells by targeting ARF6, NEDD9 and MT1-MMP.

Waheed S, Dorjbal B, Hamilton CA … +3 more , Maxwell GL, Rodriguez GC, Syed V

Oncotarget · 2025 Jul · PMID 40737679 · Full text

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PCAIs stimulate MAPK, PI3K/AKT pathways and ROS-Mediated apoptosis in aromatase inhibitor-resistant breast cancer cells while disrupting actin filaments and focal adhesion.

Lazarte JMS, Ofosu-Asante K, Tilghman SL … +1 more , Lamango NS

Oncotarget · 2025 Jul · PMID 40736275 · Full text

The estrogen receptor is overexpressed in and promotes 67-80% and 90% of female and male breast cancer cases, respectively. Hormone independence, enhanced motility, and signaling by growth factors have been attributed to... The estrogen receptor is overexpressed in and promotes 67-80% and 90% of female and male breast cancer cases, respectively. Hormone independence, enhanced motility, and signaling by growth factors have been attributed to aromatase inhibitor (AI) resistance and MAPK pathway activation. We used long-term letrozole-treated (LTLT-Ca) breast cancer cells to evaluate polyisoprenylated cysteinyl amide inhibitors (PCAIs) as potential therapies for AI-resistant breast cancer. PCAIs specifically disrupt G-proteins such as KRAS, an upstream regulator of MAPK and PI3K/AKT pathways. PCAIs were tested against the viability, phosphorylation of MAPK and PI3K/AKT pathways, apoptosis, and migration of LTLT-Ca cells. NSL-YHJ-2-27 was potent against LTLT-Ca viability with an EC50 of 4.8 μM. MEK (p-MEK1/2), ERK (p-ERK1/2), and p90RSK (p-p90RSK) phosphorylation were significantly increased by 2-, 2-, and 6.4-fold, respectively. PCAIs increased AKT phosphorylation 36-fold. NSL-YHJ-2-27 at 2, 3 and 5 μM stimulated ROS generation by 4-, 8- and 10-fold, respectively. PCAIs inhibited cell proliferation and colony formation by 95% and 74%, respectively, increased active caspase 7 and BAX 1.5-fold and 56%, respectively. NSL-YHJ-2-27 (10 μM) induced LTLT-Ca spheroid degeneration by 61%. LTLT-Ca cell migration was inhibited by 31 and 80% following treatment with 2 and 5 μM NSL-YHJ-2-27, respectively. NSL-YHJ-2-27 disrupted F-actin filaments, vinculin punctates and levels by 33%. These results indicate that the PCAIs' activation of the MAPK and PI3K/AKT pathways causes apoptosis, possibly through proapoptotic p-p90RSK isoforms, AKT-induced ROS production or anoikis through disruption of focal adhesion. These effects against LTLT-Ca cells suggest potential PCAIs therapeutic applications against antihormonal-resistant breast cancers.

Dissecting the functional differences and clinical features of R-spondin family members in metastatic prostate cancer.

Deacon A, Gustafson A, Makovec A … +14 more , Boytim E, von Dohlen G, Moline D, Kairies E, Kellen S, Ishani K, Ludwig ML, John E, Anike A, Nguyen HD, Dehm SM, Drake JM, Antonarakis ES, Hwang J

Oncotarget · 2025 Jul · PMID 40711886 · Full text

This study investigates the R-spondin family of genes (), a group of secreted proteins that act as Wnt regulators, and their subsequent role in advanced prostate cancer (PC). When evaluating transcriptomic data from prim... This study investigates the R-spondin family of genes (), a group of secreted proteins that act as Wnt regulators, and their subsequent role in advanced prostate cancer (PC). When evaluating transcriptomic data from primary and metastatic PC patients, we found that alterations in were more prevalent than in other RSPO family members or Wnt-regulating genes and . Further, we found that alterations in PCs were significantly associated with worse disease-free survival. Through our modeling, RSPO2 exhibited strong positive associations with genes regulating epithelial-mesenchymal transition (EMT) and double-negative prostate cancer (DNPC), but had negative correlations with androgen receptor (AR) and AR-associated genes. Furthermore, 3D modeling of RSPO2 revealed structural differences between itself and other RSPOs. In cell lines, overexpression caused up-regulation of EMT pathways, including EMT-regulatory transcription factors and . Conversely, this was not observed when was overexpressed in the same models. These findings highlight that, in PC, RSPO2 functions as a unique member of the R-spondin family by promoting genes and signaling pathways associated with aggressive PC, and amplifications are associated with poor outcomes in PC patients.

Comprehensive genomic profiling of over 10,000 advanced solid tumors.

De La O JP, Hoag JR, Deem AK … +8 more , Wang M, Starodynov A, Udhane SS, LoBello JR, Therala N, Hall DW, Basu GD, Baehner FL

Oncotarget · 2025 Jul · PMID 40711866 · Full text

PURPOSE: To summarize clinically relevant genomic alterations in solid tumor samples from over 10,000 patients. METHODS: Descriptive statistics were used to summarize findings of retrospectively analyzed OncoExTra assay... PURPOSE: To summarize clinically relevant genomic alterations in solid tumor samples from over 10,000 patients. METHODS: Descriptive statistics were used to summarize findings of retrospectively analyzed OncoExTra assay data from solid tumor samples. RESULTS: The analysis cohort included 11,091 solid tumor samples from 10,768 patients. Therapeutically actionable alterations were present in 92.0% of patient samples. Biomarkers associated with on- or off-label FDA-approved therapies were detected in 29.2% and 28.0% of samples, respectively. The prevalence of hotspot alterations detected at variant allele frequency (VAF) <5% was analyzed among 7,481 samples (67.5%) harboring ≥1 of these events: 13.7% (1,022 of 7,481) had ≥1 alteration detected at VAF <5%, and 9.8% (558 of 5,690) of hotspot alterations associated with an on- or off-label FDA-approved therapy were detected at VAF <5%. Common and rare mutations in the promoter were found in 8.4% (933) of samples. Whole transcriptome sequencing detected clinically relevant fusions in 7.5% of samples, with highest frequencies in prostate cancer (42.0%). The transcript was found in 14 NSCLC samples (2.7%). CONCLUSIONS: The broad capabilities of the OncoExTra assay detected therapeutically actionable and other clinically relevant genomic events that can inform clinical decision-making for patients with advanced solid tumors.

Extracorporeal blood filtration leading to tumor growth arrest and reduced analgesic requirements in Stage IV poorly differentiated pancreatic adenocarcinoma: A case report.

Ulahannan S, Smith P, Rios J … +1 more , Chawla L

Oncotarget · 2025 Jul · PMID 40698924 · Full text

BACKGROUND: Despite significant strides in the management of metastatic solid tumors over the past few decades, metastatic disease remains a major clinical challenge, often leading to unfavorable patient outcomes. Circul... BACKGROUND: Despite significant strides in the management of metastatic solid tumors over the past few decades, metastatic disease remains a major clinical challenge, often leading to unfavorable patient outcomes. Circulating tumor cells (CTCs), which shed from the primary tumor, have the potential to disseminate and establish distant metastases, contributing to disease progression and reduced survival rates. Removal of CTCs via extracorporeal blood filtration could have significant therapeutic implications. CASE: A 51-year-old woman was diagnosed with metastatic poorly differentiated adenocarcinoma after presenting with severe abdominal pain. She deferred conventional chemotherapy options and elected treatment with CTC removal using an extracorporeal blood filter. After 9-12 filtration sessions of treatment over 12 months, she reported significant clinical improvement and staging scans demonstrated stable disease without evidence of new metastases. CONCLUSION: Therapeutic modalities that explore CTC removal via blood filtration may potentially have promising clinical benefits. More prospective studies are required to determine the utility of this therapeutic strategy in patients with metastatic solid tumors. Our patient demonstrated significant clinical improvement with scans demonstrating stable disease.

Statins exhibit anti-tumor potential by modulating Wnt/β-catenin signaling in colorectal cancer.

Tripathi S, Gupta E, Naik R … +4 more , Khare S, Mir R, Kamat S, Galande S

Oncotarget · 2025 Jul · PMID 40689929 · Full text

Colorectal cancer remains the second leading cause of cancer-related deaths worldwide, highlighting the urgent need for more effective therapies and a deeper understanding of its molecular basis. Drug repurposing has gai... Colorectal cancer remains the second leading cause of cancer-related deaths worldwide, highlighting the urgent need for more effective therapies and a deeper understanding of its molecular basis. Drug repurposing has gained traction as a viable strategy to target dysregulated oncogenic pathways. Statins, commonly prescribed for lowering cholesterol, have recently shown potential anti-cancer effects. In this study, we explore how statin treatment influences lipid metabolism, gene expression, and proteomic profiles in colorectal cancer models. Our findings provide direct evidence that statins selectively modulate key components of the Wnt/β-catenin signaling pathway, a major driver of adenoma formation, including members of the special AT-rich sequence-binding (SATB) protein family. We show that statin treatment downregulates SATB1, a known promoter of tumorigenesis in the context of Wnt activation, while simultaneously upregulating SATB2, which plays an opposing role. This reciprocal regulation shifts cellular phenotypes between epithelial and mesenchymal states in 3D spheroid models. Together, these results highlight the therapeutic potential of statins in colorectal cancer and support their consideration in drug repurposing approaches.

microRNAs in soft tissue sarcoma: State of the art and barriers to translation.

Titerina EK, Ferlita A, Beane JD

Oncotarget · 2025 Jul · PMID 40668701 · Full text

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A novel anti-human CD25 mAb with preferential reactivity to activated T regulatory cells depletes them from the tumor microenvironment.

Buszko M, Jones M, Chempati S … +5 more , Morina L, Ward K, Habte H, Dziegielewski M, Shevach EM

Oncotarget · 2025 Jul · PMID 40632611 · Full text

T play a deleterious role in the tumor microenvironment by suppressing anti-tumor effector T cells. Deletion of T can result in an enhanced anti-tumor response. It has been difficult to identify a cell surface antigen th... T play a deleterious role in the tumor microenvironment by suppressing anti-tumor effector T cells. Deletion of T can result in an enhanced anti-tumor response. It has been difficult to identify a cell surface antigen that is uniquely expressed on T which can be targeted by a deleting mAb. We immunized mice with human T cells which had been activated and expanded . One hybridoma (2B010) which recognized CD25 was identified. 2B010 demonstrated selective reactivity to T cells that had been expanded in culture for 5 days, but displayed similar reactivity to a conventional anti-CD25 mAb on freshly expanded T. 2B010 did not block the binding of IL-2 in the STAT5 phosphorylation assay and had no effect on the proliferation of T or on T suppressor function. It selectively reacted with T activated during xeno-GVHD and produced a selective deletion of T from mice undergoing xeno-GVHD. Administration of 2B010 to tumor bearing humanized mice resulted in a profound depletion of T from the TME and activation of CD8 T cells. No effect on tumor growth was observed. 2B010 represents a candidate for treatment of patients with cancer either alone or together with check point inhibitors.

Retraction: Up-regulation of microRNA let-7c by quercetin inhibits pancreatic cancer progression by activation of Numbl.

Nwaeburu CC, Bauer N, Zhao Z … +4 more , Abukiwan A, Gladkich J, Benner A, Herr I

Oncotarget · 2025 Jun · PMID 40560069 · Full text

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Hypoxia induced lipid droplet accumulation promotes resistance to ferroptosis in prostate cancer.

Chauhan SS, Vizzerra AD, Liou H … +4 more , Flores CE, Snider AJ, Snider JM, Warfel NA

Oncotarget · 2025 Jun · PMID 40560062 · Full text

Ferroptosis is a mode of cell death that relies on iron metabolism and lipid peroxidation. Preclinical and clinical studies indicate that ferroptosis suppresses tumor growth, and dysregulation of ferroptosis promotes tre... Ferroptosis is a mode of cell death that relies on iron metabolism and lipid peroxidation. Preclinical and clinical studies indicate that ferroptosis suppresses tumor growth, and dysregulation of ferroptosis promotes treatment resistance in cancer. Hypoxia is a universal feature of solid tumors that is particularly relevant to prostate cancer (PCa), which arises in the hypoxic peripheral zone of the organ. Hypoxia has been implicated in resistance to ferroptosis and other forms of cell death, but how hypoxia impacts the sensitivity of PCa to ferroptosis inducing agents (FINs) has not been well studied. Here, we show that hypoxia dramatically reduces the sensitivity of PCa cell lines to mechanistically distinct FINs, Erastin (xCT inhibitor) and RLS3 (GPX4 inhibitor) by inducing lipid droplet (LD) accumulation. Transcriptomic analysis revealed that hypoxia significantly reduced the expression of genes related to incorporating polyunsaturated fatty acids into phospholipids (ACSL4, LPCAT3), and parallel lipidomic analysis demonstrated that hypoxia significantly decreased the levels of the ferroptosis-prone lipid class, phosphatidylethanolamine (PE) and increased production of neutral lipid species, cholesteryl ester (ChE (22:5)) and triglycerides (TG(48:1), TG:(50:4), and TG(58:4)). Targeting LD biogenesis and lipogenesis did not alter sensitivity to RSL3 under hypoxia. These findings suggest that hypoxia promotes ferroptosis resistance in PCa by altering lipid metabolism at the transcriptional level, by producing lipids that are less susceptible to peroxidation, and at the cellular level, by increasing storage in LDs. Thus, manipulating LD dynamics represents a promising strategy to overcome hypoxia-induced resistance to ferroptosis and improve the success of PCa treatment.
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